Gastrointestinal
Peptic ulcer disease: H. pylori testing and treatment regimens
— H. pylori infection (gram-negative, urease-producing spiral bacterium): causes ~70% of gastric ulcers and ~90% of duodenal ulcers in untreated populations
— NSAID/aspirin use: prostaglandin inhibition reduces mucosal defense; risk multiplied by age >65, prior PUD, concurrent steroids/anticoagulants, high-dose or multiple NSAIDs
— Epigastric pain with food relationship (duodenal: relieved by food; gastric: worsened by food)
— Dyspepsia >4 weeks in patient ≥60, or any age with alarm features: weight loss, dysphagia, anemia, melena/hematemesis, persistent vomiting, palpable mass, family history of upper GI cancer
— Iron-deficiency anemia in middle-aged adult without obvious source
— Patient on chronic NSAIDs/aspirin with new epigastric symptoms

— Duodenal ulcer: pain 2–5 hours postprandial, relieved by food or antacids; patients often gain weight
— Gastric ulcer: pain shortly after eating, worsened by food; patients may avoid eating and lose weight
— Vomiting persistent/recurrent
— Bleeding (melena, hematemesis, hematochezia from brisk UGIB)
— Anemia (iron-deficiency)
— Dysphagia/odynophagia
— Mass (palpable abdominal or lymphadenopathy)
— Age ≥60 with new-onset dyspepsia
— Progressive unintentional weight loss
— NSAID/aspirin use (including OTC, prescription, herbals containing salicylates) — quantify daily dose and duration
— H. pylori risk factors: birth/residence in endemic area, crowded housing, family history of gastric cancer
— Smoking and alcohol (impair healing, increase recurrence)
— Anticoagulants, SSRIs, bisphosphonates, steroids — all increase bleeding/ulcer risk
— Prior PUD or H. pylori treatment and which regimen (predicts resistance)

— Localized epigastric tenderness without peritoneal signs in uncomplicated disease
— Succussion splash (audible splash on shaking abdomen 3+ hours postprandial) → gastric outlet obstruction from chronic scarring of pyloric channel ulcer
— Rigid, board-like abdomen with rebound and guarding → perforated ulcer with peritonitis — surgical emergency
— Diminished/absent bowel sounds with distention → ileus from perforation or obstruction
— Melena: black tarry stool requires ≥50 mL blood; very specific for upper source
— Hematemesis or "coffee-ground" emesis
— Hematochezia in setting of brisk UGIB indicates massive bleed (≥1000 mL) with rapid transit
— Pallor, conjunctival rim pallor, cool extremities, delayed cap refill
— HR >100, SBP <100, orthostatic drop (SBP ↓≥20 or HR ↑≥20 on standing) → significant volume loss (≥15–30%)
— Shock index (HR/SBP) ≥1.0 predicts need for transfusion and intervention
— Mental status changes, oliguria → class III–IV shock

— CBC (anemia from occult blood loss)
— BMP (BUN/Cr ratio, electrolytes if vomiting)
— Iron studies if anemic (microcytic, low ferritin <30)
— Pregnancy test in reproductive-age women (alters testing/treatment)
— Consider lipase, LFTs, ECG to rule out mimics
— Urea breath test (UBT): patient drinks 13C- or 14C-labeled urea; H. pylori urease cleaves it → labeled CO2 in breath. Sensitivity & specificity >95%. First-line for active infection and test of cure.
— Stool antigen test (monoclonal EIA): sensitivity ~94%, specificity ~97%. Equivalent to UBT; cheaper, good in children and when breath test unavailable.
— Serology (IgG antibodies): detects exposure, cannot distinguish active from past infection, remains positive for years. Use only in low-prevalence settings is discouraged; reasonable in very high-prevalence populations or recent UGIB where PPI confounds other tests.
— Hold PPI for ≥2 weeks before UBT or stool antigen
— Hold antibiotics and bismuth for ≥4 weeks
— H2 blockers OK to continue (minimal effect on testing)
— Active or past PUD (any documented ulcer)
— Uninvestigated dyspepsia in patient <60 without alarm features (test-and-treat)
— Low-grade gastric MALT lymphoma
— Early gastric cancer post-resection
— Long-term NSAID/aspirin users (selective)
— Unexplained iron-deficiency anemia, ITP, vitamin B12 deficiency

— Any alarm features regardless of age
— Age ≥60 with new-onset dyspepsia
— Failed empiric or test-and-treat therapy (persistent symptoms after 4–8 weeks)
— Suspected complication (bleeding, obstruction, perforation pending stability)
— Known gastric ulcer (always biopsy to exclude malignancy)
— Rapid urease test (CLO test): biopsy placed in urea-containing media; color change from urease activity. Sensitivity ~90%, specificity ~95%. Cheap and fast. False negatives with recent PPI, antibiotics, bismuth, or active bleeding.
— Histology with H&E + special stains (Giemsa, silver): sensitivity ~95%, also evaluates for gastritis, atrophy, intestinal metaplasia, MALT, malignancy.
— Culture with susceptibility testing: gold standard for resistance assessment; reserved for refractory cases or research; slow and not widely available.
— Molecular testing (PCR for clarithromycin/levofloxacin resistance mutations): emerging standard for resistance-guided therapy.
— Gastric ulcers: multiple biopsies (≥6–8) from edge and base to exclude adenocarcinoma; repeat EGD in 8–12 weeks to confirm healing
— Duodenal ulcers: routine biopsy not required (rarely malignant); biopsy antrum + body for H. pylori

— Alarm features OR age ≥60 → EGD first
— Age <60, no alarms → non-invasive H. pylori test-and-treat
— If H. pylori negative and symptoms persist → empiric PPI trial 4–8 weeks → if still symptomatic, EGD
— H. pylori positive: eradication therapy + PPI 4–8 weeks → confirm eradication
— NSAID-induced, H. pylori negative: discontinue NSAID + PPI 4–8 weeks
— NSAID-induced, H. pylori positive: treat both — eradicate H. pylori AND stop NSAID + PPI
— Idiopathic (neither): PPI; consider gastrinoma workup if multiple/refractory
— Uses BUN, Hgb, SBP, HR, melena, syncope, hepatic disease, heart failure
— GBS = 0–1: very low risk; consider outpatient management with early outpatient EGD
— GBS ≥7: high risk for intervention; admit + urgent EGD
— Ia (spurting), Ib (oozing), IIa (visible vessel), IIb (adherent clot) → endoscopic therapy + IV PPI infusion 72h
— IIc (flat pigmented spot), III (clean base) → low rebleed risk; oral PPI, early feeding, discharge possible

— Bismuth quadruple therapy (preferred first-line per ACG 2017) — 14 days:
PPI BID + bismuth subsalicylate 524 mg QID + tetracycline 500 mg QID + metronidazole 250–500 mg QID
Use when clarithromycin resistance >15%, prior macrolide exposure, or penicillin allergy. Eradication ~85–90%.
— Clarithromycin triple therapy — 14 days:
PPI BID + clarithromycin 500 mg BID + amoxicillin 1 g BID (or metronidazole 500 mg BID if PCN-allergic)
Use only if local clarithromycin resistance <15% AND no prior macrolide exposure. Eradication is dropping (~70–80%) due to resistance — no longer preferred in most US regions.
— Concomitant therapy — 10–14 days: PPI + clarithromycin + amoxicillin + metronidazole (all together). Reasonable when bismuth unavailable.
— Vonoprazan-based regimens (potassium-competitive acid blocker): vonoprazan + amoxicillin (dual) or + clarithromycin (triple) x 14 days — superior acid suppression, better in clarithromycin-resistant strains
— Rifabutin triple therapy (Talicia: omeprazole + amoxicillin + rifabutin) — salvage option
— Never repeat clarithromycin or levofloxacin if used previously (high resistance after exposure)
— Bismuth quadruple if not used first-line
— Levofloxacin triple: PPI + levofloxacin 500 mg daily + amoxicillin 1 g BID x 14 days
— Rifabutin-based regimen
— Refer to GI; consider culture with susceptibility testing

— Mechanism: irreversibly bind H+/K+-ATPase on parietal cells; require activation in acidic environment → take 30–60 minutes before meals (typically breakfast)
— Standard agents: omeprazole 20–40 mg, pantoprazole 40 mg, lansoprazole 30 mg, esomeprazole 20–40 mg, rabeprazole 20 mg
— Duration for PUD: duodenal ulcer 4 weeks, gastric ulcer 8 weeks
— IV PPI (pantoprazole) for bleeding ulcers: 80 mg bolus + 8 mg/h infusion x 72h post-endoscopic hemostasis, or intermittent 40 mg IV BID
— B12, magnesium, iron, calcium malabsorption
— Increased risk of C. difficile, community-acquired pneumonia, enteric infections
— Possible association: hip fracture, AKI/CKD, dementia, fundic gland polyps
— Rebound hyperacidity on abrupt discontinuation
— Sucralfate: binds ulcer base; QID dosing on empty stomach; binds other meds (separate by 2h); useful in stress ulcer prophylaxis and selected refractory cases
— Misoprostol (synthetic PGE1): prevents NSAID ulcers; QID dosing limits use; contraindicated in pregnancy (abortifacient)
— Bismuth subsalicylate: cytoprotective + antibacterial; avoid in renal failure and aspirin allergy
— Co-prescribe PPI daily with NSAID
— Consider COX-2 selective (celecoxib) + PPI in highest risk — but weigh CV risk
— Test and eradicate H. pylori before starting long-term NSAID/aspirin in PUD history

— Higher prevalence of NSAID use (osteoarthritis, cardiovascular indications) and antiplatelet/anticoagulant therapy
— Asymptomatic ulcers until bleeding or perforation — diminished pain perception
— Higher mortality from UGIB (5–10% vs 2% overall)
— Lower threshold for EGD (any new dyspepsia ≥60 = scope)
— Identify NSAIDs (including OTC ibuprofen, naproxen, topical, combination cold remedies)
— Deprescribe when possible; substitute acetaminophen for analgesia
— If NSAID essential: lowest dose, shortest duration, co-prescribe PPI, eradicate H. pylori first
— Review anticoagulants, antiplatelets, SSRIs, steroids, bisphosphonates — additive risk
— Avoid bismuth and magnesium-containing antacids in advanced CKD (accumulation, encephalopathy, hypermagnesemia)
— Clarithromycin: reduce dose if CrCl <30 mL/min
— Tetracycline: avoid in significant renal impairment; doxycycline not a validated substitute in standard regimens but sometimes used
— Metronidazole: no renal dose adjustment; reduce if HD (administer after dialysis)
— Amoxicillin: dose-adjust if CrCl <30
— PPIs: no renal dose adjustment, but monitor for acute interstitial nephritis (idiosyncratic)
— Metronidazole: reduce dose in severe hepatic failure
— Clarithromycin and PPIs: hepatically metabolized — use cautiously, prefer pantoprazole (less CYP interaction)
— Bismuth: caution given salicylate component
— Clarithromycin + statins (rhabdo), warfarin (↑INR), QT-prolonging drugs, calcium channel blockers
— PPIs + clopidogrel (omeprazole/esomeprazole reduce clopidogrel activation via CYP2C19 — prefer pantoprazole)
— Tetracycline chelates Ca, Mg, Fe, Al — separate from antacids/dairy by 2 hours

— PUD is uncommon in pregnancy (protective hormonal effects, ↑mucus production)
— Diagnosis: avoid radiation; EGD is safe in 2nd trimester if essential; non-invasive H. pylori testing via stool antigen preferred (UBT uses 13C — safe; 14C contraindicated)
— Treatment of PUD:
Lifestyle, antacids (Ca-based preferred), sucralfate (category B) first-line
PPIs: most considered low-risk; pantoprazole and lansoprazole widely used; avoid omeprazole if alternatives exist (older Category C)
H2 blockers: famotidine safe in pregnancy
— Defer H. pylori eradication until postpartum unless complicated disease, because:
Tetracycline contraindicated (teratogenic, fetal bone/teeth)
Bismuth contraindicated (salicylate component, fetal hemorrhage)
Clarithromycin: avoid in 1st trimester
Metronidazole: avoid 1st trimester per traditional teaching; safer later
— Misoprostol absolutely contraindicated (uterotonic, abortifacient)
— H. pylori acquired in childhood, often asymptomatic
— Test only with documented PUD or refractory IDA — "test and treat" not recommended in asymptomatic children
— Use biopsy-based testing during EGD (preferred) or stool antigen
— Regimen: PPI + amoxicillin + clarithromycin x 14 days (weight-based); avoid tetracycline in <8 years and bismuth controversial
— Avoid serology (poor performance in children)
— Consider CMV, HSV, fungal ulcers in addition to H. pylori — biopsy critical
— Drug interactions: clarithromycin with tacrolimus, cyclosporine, HIV protease inhibitors
— Higher UGIB risk (varices coexist); always differentiate variceal vs ulcer bleeding at EGD
— Avoid NSAIDs entirely (renal + bleeding risk)

— Posterior duodenal bulb ulcers erode into gastroduodenal artery → brisk hematemesis/melena
— Lesser curve gastric ulcers erode into left gastric artery
— Management: resuscitate, IV PPI, EGD with dual hemostatic therapy (epinephrine + thermal/clip), angioembolization if refractory, surgery as last resort
— 30-day mortality 2–10%; rebleeding rate 10–20% with high-risk stigmata
— Sudden severe epigastric pain, rigid abdomen, tachycardia, fever
— Free air under diaphragm on upright CXR (~75% sensitive); CT abdomen more sensitive
— Treatment: IV fluids, broad-spectrum antibiotics (cover gram-negatives + anaerobes — e.g., piperacillin-tazobactam), PPI, emergent surgery (Graham omental patch is classic for duodenal perforation); H. pylori eradication post-op if positive
— Mortality 10–25%, higher in elderly with delayed surgery
— Persistent pain radiating to back, elevated lipase mimicking pancreatitis
— Diagnose with CT or EGD; intensive medical therapy may suffice; surgery if refractory
— Chronic pyloric channel or duodenal ulcer scarring
— Postprandial nonbilious vomiting, early satiety, weight loss, succussion splash
— Hypochloremic, hypokalemic metabolic alkalosis with paradoxical aciduria
— Diagnose with EGD ± gastric emptying study
— Treatment: NG decompression, IV fluids/electrolyte repletion, IV PPI, eradicate H. pylori, endoscopic balloon dilation of strictures; surgery (pyloroplasty, gastrojejunostomy) for refractory

— Uncomplicated dyspepsia or PUD without alarms
— Glasgow-Blatchford score 0–1 in mild UGIB with reliable follow-up
— Stable post-discharge after low-risk endoscopic findings (Forrest IIc/III)
— Symptomatic anemia from chronic GI loss requiring transfusion
— Hemodynamically stable UGIB after resuscitation with high-risk lesion treated endoscopically
— Inability to tolerate POs (vomiting, partial obstruction)
— Significant comorbidity preventing safe outpatient EGD
— Hemodynamic instability after initial resuscitation (persistent SBP <90 or HR >120)
— Active hematemesis with airway concern → consider intubation for airway protection before EGD
— Massive transfusion (≥4 units PRBC in 24h)
— Variceal vs. ulcer bleeding unclear in cirrhotic
— Forrest Ia/Ib lesions post-endoscopic therapy, hemodynamic borderline
— Gastroenterology: every confirmed/suspected bleeding ulcer; refractory dyspepsia, suspected ZES, MALT lymphoma
— Interventional radiology: persistent/recurrent bleeding despite endoscopic therapy (angiography + embolization, especially gastroduodenal artery)
— General surgery: perforation (emergent), refractory bleeding after 2 failed endoscopic attempts, gastric outlet obstruction not responsive to dilation, suspected malignancy
— Hematology: massive transfusion, suspected coagulopathy beyond anticoagulation reversal
— Cardiology: if interrupting antiplatelet after DES <12 months or recent ACS
— Transfuse Hgb <7 g/dL in most patients
— Hgb <8 g/dL if CAD, hemodynamic instability, ongoing brisk bleeding
— Target Hgb 7–9, not >10 (over-transfusion worsens outcomes)
— Warfarin: vitamin K + 4-factor PCC if life-threatening
— Dabigatran: idarucizumab
— Factor Xa inhibitors: andexanet alfa or 4-factor PCC

— Chronic epigastric pain, postprandial fullness, early satiety without structural lesion at EGD
— Rome IV criteria; diagnosis after H. pylori excluded and treated, PUD excluded
— Treatment: PPI trial, tricyclic antidepressants (amitriptyline low-dose), prokinetics
— Heartburn, regurgitation, worsened recumbent/postprandial, relieved by acid suppression
— Overlaps with PUD; PPI trial helps differentiate
— Alarm features → EGD
— Mucosal inflammation without discrete ulcer ≥5 mm
— Causes: NSAIDs, alcohol, stress (ICU patients), H. pylori
— Always exclude in gastric ulcer with biopsies + repeat EGD
— Risk: H. pylori chronic infection, atrophic gastritis, intestinal metaplasia, smoking, family history, pernicious anemia
— Linitis plastica = diffuse infiltrative variant
— H. pylori-driven in 90% of cases
— Low-grade MALT often regresses with H. pylori eradication alone — confirmed by post-treatment endoscopy
— Multiple/recurrent/distal duodenal or jejunal ulcers; refractory to standard therapy
— Diarrhea, steatorrhea (acid inactivates pancreatic enzymes)
— Fasting serum gastrin >1000 pg/mL off PPI (hold PPI 1 week, H2 blocker 2 days) is diagnostic; if 100–1000, do secretin stimulation test (paradoxical rise)
— Associated with MEN1 (parathyroid, pancreas, pituitary) in 25%

— Acute coronary syndrome (especially inferior MI): can present as epigastric pain, nausea, diaphoresis. Always ECG in patients ≥50 or with risk factors and new epigastric symptoms.
— Pericarditis, aortic dissection (radiates to back, BP differential between arms)
— Acute pancreatitis: epigastric pain radiating to back, lipase >3x ULN, alcohol/gallstone history
— Chronic pancreatitis: deep boring pain, steatorrhea, calcifications on CT
— Cholecystitis/biliary colic: RUQ/epigastric, postprandial (fatty meal), Murphy sign, US findings
— Choledocholithiasis/cholangitis: jaundice, Charcot triad
— Pancreatic cancer: weight loss, painless jaundice (head), back pain (body/tail), new-onset diabetes
— Hepatitis, hepatic congestion (RHF), hepatic abscess
— Mesenteric ischemia: postprandial pain "fear of food," weight loss in chronic; acute = pain out of proportion to exam, lactic acidosis, AFib history
— AAA: pulsatile mass, hypotension, back pain — emergency
— DKA: nausea/vomiting, abdominal pain, hyperglycemia, anion gap acidosis
— Adrenal insufficiency: nausea, hypotension, hyponatremia
— Hypercalcemia: nausea, pain, constipation

— UBT or stool antigen ≥4 weeks after antibiotics complete and ≥2 weeks off PPI
— Serology not valid (stays positive)
— Re-treatment with salvage regimen if persistent infection — do not repeat prior antibiotics
— Discontinue NSAID if at all possible; switch to acetaminophen
— If NSAID essential (e.g., RA, severe OA): use lowest effective dose, shortest duration, add daily PPI indefinitely, eradicate H. pylori first
— Consider COX-2 selective (celecoxib) + PPI in highest-risk patients; weigh cardiovascular risk
— Avoid concurrent aspirin, anticoagulants, steroids when possible
— Resume aspirin within 1–7 days of hemostasis if indicated for secondary CV prevention — sustained discontinuation increases CV mortality
— Continue daily PPI long-term when aspirin + PUD history coexist
— Smoking cessation (delays healing, doubles recurrence)
— Alcohol moderation
— Stress management; address anxiety/depression contributing to dyspepsia
— Avoid NSAIDs as discussed; counsel on hidden OTC sources
— All gastric ulcers: repeat EGD 8–12 weeks post-treatment to confirm healing and re-biopsy if not healed (malignancy)
— Duodenal ulcers: routine repeat EGD not needed if H. pylori eradicated and symptoms resolved
— Recurrent/refractory ulcers → reassess for ZES, ongoing NSAID use, persistent H. pylori
— Patients with atrophic gastritis, intestinal metaplasia, or dysplasia on biopsy → endoscopic surveillance per ACG (every 3–5 years depending on severity)
— After ulcer healing in H. pylori-eradicated, non-NSAID patients, taper PPI rather than abrupt stop
— Continue indefinitely if ongoing NSAID/aspirin, severe GERD, Barrett esophagus, ZES

— 2–4 weeks after starting eradication: assess symptom response, adherence, adverse effects
— 4–8 weeks post-therapy: test of cure (UBT or stool antigen, off PPI ≥2 weeks)
— 8–12 weeks for gastric ulcers: repeat EGD with biopsies to confirm healing and exclude malignancy
— Annual follow-up for NSAID users, patients with atrophic gastritis or metaplasia, cancer surveillance per pathology
— Symptom resolution: dyspepsia, pain, regurgitation
— Iron studies and Hgb: ensure resolution of any anemia from chronic losses; supplement iron 3–6 months until ferritin normalizes
— Renal function and magnesium on chronic PPI: BMP + Mg yearly; consider B12 every 1–2 years
— Treatment adherence: explicitly ask about completing 14-day antibiotic course
— Take PPI 30–60 minutes before breakfast (and dinner if BID) — efficacy depends on this
— Complete full 14 days of antibiotics even when symptoms resolve
— Expect black stool/tongue with bismuth (benign)
— Avoid alcohol with metronidazole (disulfiram-like reaction)
— Photosensitivity with tetracycline — sunscreen, protective clothing
— Avoid antacids within 2 hours of tetracycline (chelation)
— Hematemesis, melena, hematochezia
— Severe abdominal pain, rigid abdomen, syncope
— Persistent vomiting, inability to keep down fluids
— Unintentional weight loss, progressive dysphagia
— Cost: bismuth quadruple ~$100–200; vonoprazan combos higher; consider patient access
— Use prescription drug coverage tools and patient assistance programs
— Coordinate with PCP for chronic PPI monitoring and NSAID deprescribing
— Smoking cessation referral (nicotine replacement, varenicline, bupropion)
— Alcohol use screening (AUDIT-C); brief intervention
— Stress reduction; CBT if functional overlap

— Discuss risks: perforation (<0.1%), bleeding, infection, sedation-related cardiopulmonary events, missed lesions, anesthesia risk in comorbid patients
— Discuss benefits: diagnosis, biopsy, therapeutic intervention
— Discuss alternatives: empiric PPI, non-invasive testing
— Capacity assessment: ensure patient understands; if impaired, involve surrogate per state hierarchy
— Patient with severe arthritis insisting on NSAIDs despite ulcer history → document risk discussion, alternatives offered, co-prescribed PPI, and ongoing reassessment
— Respect autonomy while ensuring informed choice
— Stopping aspirin after recent DES (<12 months) or ACS without cardiology input can cause fatal stent thrombosis — always coordinate
— Document the risk-benefit conversation
— Patients discharged after bleeding ulcer often have fragmented follow-up — missed test-of-cure visits, missed repeat EGD for gastric ulcer healing, premature PPI discontinuation
— Ensure closed-loop communication: discharge summary to PCP, scheduled follow-up before discharge, medication reconciliation, written instructions in plain language at appropriate literacy
— Medication reconciliation: NSAIDs hidden in OTC combinations, herbal products; explicitly review at every transition
— Inappropriate long-term PPI without indication = deprescribing opportunity
— Hospital-acquired stress ulcer prophylaxis overuse: limit to high-risk ICU patients (mechanical ventilation >48h, coagulopathy, history of GI bleed)
— Avoid continuing inpatient PPI prophylaxis on discharge unless ongoing indication — a common error
— Suspected intimate partner violence in patient presenting with vague abdominal complaints and inconsistent history — screen and report per jurisdiction
— Pediatric/elder abuse with unusual injury patterns
— H. pylori prevalence higher in immigrant, low-income, and minority populations — ensure equitable screening and treatment access
— Language-concordant care and certified medical interpreters required for informed consent (NOT family members for sensitive discussions)




